ó
Þ~>Oc           @   sÀ   d  Z  d d l Z d d l Z d Z d Z e Z d e f d „  ƒ  YZ	 d e	 f d „  ƒ  YZ
 d	 e f d
 „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d „  Z d „  Z d d „ Z d S(   s´   
prpy module trees.py
Jason Corso (jcorso@acm.org)

This module has been programmed to support teaching an introduction to
 pattern recognition course.

Contains tree classifiers

iÿÿÿÿNi   id   t   DTNodec           B   s2   e  Z d  Z d d d d „ Z d „  Z d „  Z RS(   sP   
    A Decision Tree Node class.

    Links to children via reference list.
    c         C   s   | |  _  | | g |  _ d  S(   N(   t   qt   child(   t   selfR   t   leftt   right(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   __init__   s    	c         C   s   t  S(   N(   t   False(   R   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   isLeaf"   s    c         C   s2   |  j  j | ƒ d k r# |  j d S|  j d Sd  S(   Ni    i   (   R   t   queryR   (   R   t   sample(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   walk%   s    N(   t   __name__t
   __module__t   __doc__t   NoneR   R   R   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR       s   	t
   DTLeafNodec           B   s>   e  Z d  Z d d „ Z d „  Z d „  Z d „  Z d „  Z RS(   sN    
    A Leaf Node of the decision tree that stores an empirical density.

    c         C   s#   | |  _  |  j  r |  j ƒ  n  d  S(   N(   t   densityt   computeMode_(   R   R   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   2   s    		c         C   s¡   t  j | ƒ } t  j | j ƒ  d ƒ |  _ xe | D]] } t  j | | k ƒ d } t | ƒ d k ri q2 n  t | ƒ t  j t | ƒ ƒ |  j | <q2 W|  j ƒ  d S(   s7    Compute and store the empirical density at this leaf. i   i    N(	   t   npt   uniquet   zerost   maxR   t   nonzerot   lent   doubleR   (   R   t   Xt   Yt   Ut   ct   yc(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   computeDensity7   s    *c         C   s€   d } d |  _ xI t t |  j ƒ ƒ D]2 } |  j | | k r% |  j | } | |  _ q% q% Wt r| d G|  j GHd |  j GHn  d S(   sC    Compute and store the mode of the empirical density at this leaf. g        s   Density is s   Mode of the leaf is %d
N(   R   t   modet   rangeR   R   t   kVerbose(   R   t   mt   i(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   F   s    	c         C   s   t  S(   N(   t   True(   R   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   S   s    c         C   s   |  S(   N(    (   R   R
   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   V   s    N(	   R   R   R   R   R   R   R   R   R   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   ,   s   			t   DTQueryc           B   s   e  Z d  Z RS(   s?    An empty parent class to store a query for the decision tree. (   R   R   R   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR&   Z   s   t   DTQuery_AxisAlignedc           B   s/   e  Z d  Z d d d „ Z d „  Z d „  Z RS(   sS    An axis-aligned query (basically thresholds on one coordinate in the value array. c         C   s   | |  _  | |  _ d  S(   N(   t   qit   tau(   R   t   query_indexR)   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   b   s    	c         C   s   d |  j  |  j f S(   Ns&   Query_AxisAligned:  index: %d, tau %f
(   R(   R)   (   R   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   __repr__f   s    c         C   s"   | |  j  |  j k  r d Sd Sd S(   sÃ    
        A simple query response tester on the value (a vector) index query_index.

        If the value is less then tau, a 0 is returned and if it is greater than tau a 1 is returned.
        i    i   N(   R(   R)   (   R   t   value(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR	   i   s    N(   R   R   R   R   R   R+   R	   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR'   _   s   	t   DTreec           B   s5   e  Z d  Z d d „ Z d „  Z d „  Z d „  Z RS(   s!   
    A Decision Tree class.

    c         C   s   | |  _  d  S(   N(   t   root(   R   R.   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR   {   s    c         C   s   |  j  | ƒ } | j S(   s%    Classify the sample using the tree. (   t   findLeafR    (   R   R
   t   leaf(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   classify   s    c         C   s5   |  j  } x% | j ƒ  t k	 r0 | j | ƒ } q W| S(   s4    Find the leaf node in the tree for a given sample. (   R.   R   R%   R   (   R   R
   t   node(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR/   „   s    	c         C   s   |  j  | ƒ } | j S(   sD    Return the empirical distribution over the classes for the sample. (   R/   R   (   R   R
   R0   (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   probability‹   s    N(   R   R   R   R   R   R1   R/   R3   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyR-   u   s
   		c         C   s•   t  j |  ƒ } d } xu | D]m } t  j |  | k ƒ d } t | ƒ d k rS q n  t | ƒ t  j t |  ƒ ƒ } | | t  j | ƒ 7} q Wd | S(   s4    Calculate the entropy impurity for a data set (Y). g        i    g      ð¿(   R   R   R   R   R   t   log(   R   R   t   HR   R   t   cportion(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   impurity_entropy’   s    c         C   sÇ   g  } xº t  |  j d ƒ D]¥ } t j |  d d … | f ƒ } t j |  d d … | f ƒ } t j | | t j t ƒ ƒ } | d k  r£ | j t j	 t ƒ ƒ q | j t j
 | | | ƒ ƒ q W| S(   sÝ    
    Prepare a ranges list for training in the trainDTree_AxisAligned.
    
    The ranges list just basically goes through the data-range of each dimension in X and 
    gathers a set of possible thresholds for it.
    i   Ngñhãˆµøä>(   R!   t   shapeR   t   minR   t   absR   t   kDT_LenRangest   appendR   t   arange(   R   t   Rt   dt   dmint   dmaxt   dstep(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   trainDTree_prepRanges¥   s      i    c      	   C   s¦  | | ƒ } | t  k s$ | d k rA t ƒ  } | j |  | ƒ | St |  ƒ } t | ƒ } | |  j d k sr t ‚ |  j d } d }	 t ƒ  }
 t ƒ  } d } d } x;t	 | ƒ D]-} | |
 _
 x| | D]} | |
 _ g  } g  } xV t	 | ƒ D]H } |
 j |  | d d … f ƒ d k r-| j | ƒ qò | j | ƒ qò Wt | ƒ t j | ƒ } | | | ƒ } t | ƒ t j | ƒ } | | | ƒ } | | | | | } | |	 k rÊ | }	 | | _
 | | _ | } | } qÊ qÊ Wq° W| d k sù| d k rt ƒ  } | j |  | ƒ | St |  | d d … f | | | | d ƒ } t |  | d d … f | | | | d ƒ } | d k rŒt | | | ƒ St t | | | ƒ ƒ Sd S(   s‘  
    Train a decision tree using data set (X,Y).

    Convention on (X,Y) is that each row is a sample in the data set, X has the 
    values of the data and Y has the class label.

    impurity is a function that takes X,Y and returns the impurity of the data set

    ***Specific to an axis-aligned query case, which is a fairly general case...
    ***Code flow for clarity rather than speed...
    i    i   N(   t   kDT_MaxDepthR   R   RC   R   R8   t   AssertionErrorR'   R   R!   R(   R)   R	   R<   R   R   t   trainDTree_AxisAlignedR    R-   (   R   R   t   impurityt   deptht   IR0   t   rangest   dimt   numt   bestIgt   Qt   bestQt   bestLt   bestRR(   t   tt   LR>   R$   t   Lportiont	   Limpurityt   Rportiont	   Rimpurityt   Igt	   leftChildt
   rightChild(    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyRF   ¼   sX    					%			--(   R   t	   datatoolst   numpyR   RD   R;   R%   R"   t   objectR    R   R&   R'   R-   R7   RC   RF   (    (    (    s2   /home/csefaculty/jcorso/555code/code/prpy/trees.pyt   <module>
   s   .		